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Bioinformatics lab
Current members
- Paul Moore, M.Sc. student
- Simranjeet Singh, M.Sc. student
- Jonathan Peters, M.Sc. student
- Lukas Bozinov, B.Sc. student
Former members
- Ph.D.
- Seyed Mohsen Hosseini, Ph.D. (Postdoctoral Fellow, York University)
- Qin Dong, Ph.D.
- Yiwei Li, Ph.D. (Deep Learning Compiler, AMD)
- Nilesh Khiste, Ph.D. (Cadence Design Systems)
- Mike Molnar, Ph.D. (Ontario Institute for Cancer Research)
- Bahlul Haider, Ph.D. (Microsoft)
- Liviu Tinta, Ph.D. (Google)
- Sorin Constantinescu, Ph.D. (IBM)
- M.Sc.
- Julia Malec, M.Sc. (NSERC CGS-M, Ph.D. student, Johns Hopkins University)
- Jonathan Oxman, M.Sc.
- Zahra Fazel, M.Sc. (AI Engineer, Huawei)
- Sepehr Ashrafzadeh, M.Sc. (AI/ML Engineer, QEA Tech)
- Dipanjan Chatterjee, M.Sc. (Manager - AI/ML Computational Science, Accenture)
- Sourajit Basak, M.Sc. (Machine Learning Engineer, Citco Group Limited)
- Arnab Mallik, M.Sc. (AGFA HealthCare)
- Valeria Portes de Cerqueira Cesar, M.Sc. (J.D.Power)
- Debanjan Guha Roy, M.Sc. (Huawei)
- Stephen Lu, M.Sc. (Rapid7)
- Muhammed Ahmed, M.Sc. (Microsoft)
- Dimo Angelov, M.Sc. (Pacific Life)
- Wenjing Wan, M.Sc. (Facebook)
- Yu Qian, M.Sc. (SurveyMonkey)
- Ehsan Haghshenas, M.Sc. (Ph.D., Simon Fraser University) (Ocean Genomics)
- Qin Dong, M.Sc. (Ph.D., Western)
- Yiwei Li, M.Sc. (Ph.D., Western)
- Lankesh Shivanna, M.Sc. (Achievers)
- Hamid Mohamadi, M.Sc. (Ph.D., University of British Columbia) (Illumina)
- Mike Molnar, M.Sc. (Ph.D., Western)
- Farideh Fazayeli, M.Sc. (Ph.D., University of Minnesota) (Google)
- Zhewei Liang, M.Sc. (Ph.D., Western)
- Anahita Mansouri, M.Sc. (Ph.D., Simon Fraser University)
- Shima Khoshraftar, M.Sc. (Ph.D., York University)
- Cristian Popescu, M.Sc. (BMO)
- Cerasela Toba, M.Sc. (Telus)
- Emine Seid-Hilmi, M.Sc.
- Liviu Tinta, M.Sc. (Ph.D., Western)
- Baozhen Shan, M.Sc. (Ph.D., Western) (CEO, Bioinformatics Solutions)
- Sorin Constantinescu, M.Sc. (Ph.D., Western)
- Mike Davidson, M.Sc.
- Yuan Man, M.Sc.
- Denby Wong, M.Sc.
- B.Sc.
- Alicia Serdyuk, B.Sc.
- Paul Moore, B.Sc.
- Ramtin Sirjani, B.Sc.
- Julia Malec, B.Sc.
- Riley Gavigan, B.Sc.
- Youssef Gendy, B.Sc.
- Pierce Saly, B.Sc.
- Melanie Imough, B.Sc.
- Justin McDonald, B.Sc.
- Mike Molnar, B.Sc.
- Jonathan Cable, B.Sc.
- Undergraduate summer research awards
- Simranjeet Singh, NSERC USRA
- Jonathan Peters, NSERC USRA
- Nicolas Milligan-Torres, NSERC USRA
- Franck Limtung, NSERC USRA
- Julia Malec, USRI
- Paul Moore, USRI
- Pierce Saly, NSERC USRA
Computing power
We had in 2013 one of the few computer clusters with 1TB of RAM in Canada, our own shadowfax (supported by an NSERC RTI grant), part of the goblin cluster of SHARCNET:
- 1 node: 32 cores, 1TB RAM
- 4 nodes: 12 cores, 256GB RAM each
